Browse of TCMCG049C41825 protein

CDS

Accession Number	TCMCG049C41825
gbkey	CDS
Protein Id	XP_034928559.1
Location	join(214083..214646,214840..214973,215195..215330,215484..215537,215619..215765,215851..216002,216081..216165,216255..216521,216665..216811,216897..217052,217864..217931,218494..218616,218693..218792,218898..219010,219613..219891,220011..220211,220532..220625,220749..220820,221409..221507,221817..221939)
Gene	LOC118059715
GeneID	118059715
Organism	Populus alba

Protein

Length	1037aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA638679
db_source	XM_035072668.1
Definition	DNA repair protein RAD5A isoform X1 [Populus alba]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K15505        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGAACCAAGTTAACCGAAGAGCTAGTCTCCACCGTCCGATCAATCGTAGGCTGTGATTTCTCCGATATGGACATAATTAGAGCTCTCCACTTGGCAAAAAACGACCCCACCGCTGCAATCAACATCATCCTTGATACCCCGAATTTTATTTCCAAACAAAAAAACCTAACCCCCAAAACCCCAAATCCAAAATCTAAAACCGTACCCTACAAGCCACCCAATTTTGTCGTTAAAGACAATGGAAACCGTAACTCGAGCCAGAATTTAGAAGTCAATTGCGTTGAAAATGACGCGACTGACAGCACTGTTGGTGATAATGGGAGTGTTTCGGGTTTGGCTGGGAGTGAATGGTGGTTTGTTGGTTGCGGTGAAGTGGCGGGGTTGTCGACGTGTAAAGGGAGGAGAGTGAAGGCTGGTGATGAAGTGGATTTCACATTTCCTTTGAAGAGTAAAAGTTCGATTTCGCCTTCGCCTTCGCCTGGTAAGGGTTCTGGGAGGAGAAGGCAGGCTGCGACAGCGTGCTCAGAGATTGTTAGGTTTTCTACAAAAGATAGTGGAGAGCTTGGTCGAATACCTAATGATTGGGCACGGTGTCTTTTGCCGCTTGTTAGAGATGGAAAGGTCAGGATTATGGGATGTTGTAAATCTGCTCCTAACGTGCTAGGCATAATGGATACAATTCAATTATCAATAAGTGTATACTTGAATAGTGTAATGTTCCACAAGCACCACCGGACCTCACTTAAAGCAACTGCCAATTCCACTGAAGAAACAGTCGGTCATCCTCTTTCAATCCTTTTCAGCTTGCTTGGCCTGACCCCTTTTAAGAAGGCAGAATTTACGCCTGCTGATTTGAACACAAGGAAGCGACCTCTGAACTCAAAGGATGGTTCTGGTCTTCCCGTGTCATTGTTAAACGCCAACAAGTCTAAGAATCAATCTGGAAATGGAAATGAAATTGAGAATGAGGAGTCCGTTTCAGATGCAGATCTTGAGAATATTGTTGGCGGTGGAGACAACTCTGAGTTAGAGGAAATGGATCCTCCAAGTACGCTCCAATGTGAGCTTCGTCCCTACCAAAAGCAGGCCCTACATTGGATGATTCAGCTGGAGAAGGGAAAATGCATGGATGGGGCAGCAACAACTCTTCATCCATGTTGGGAGGCTTATCATTTAGCAGACAAGAGGGAGCTTGTTGTCTATCTGAATGTTTTTTCAGGTGATGCTACAATAGAATTTCCAAGCACACTTCAAATGGCCAGAGGAGGAATTCTGGCAGATGCTATGGGACTTGGGAAGACCATCATGACCATATCCCTCCTACTCACTCATTCAGACAAGGGTGGGTTATCAAATAGTCAATCTGGGAGTCAGCTTTGCACTGGAGGTGGTTCAAGTGATAACTCAGACCAACATCCAAATCAATTGAACAAGGCAACAAAATTTTCAGGCATTGATAAGTTGAAGCAAACGAAGATGCTTGTAAACGGTGGCAATCTAATAATATGTCCAATGACTCTTCTGGGCCAGTGGAAGGCGGAGTTAGAAATTCATGCCCAACCTGGTTCTTTGTCTGTTTATGTTCATTACGGACAAAGCAGAGTGAAGGATGCAAATTTTCTTGCCCAGAGTAATGTTGTAATAACTACATATGGAGTGTTAGCCTCAGATTTTTCAGCAGAGGGTGCTGTAGGGAATGGGGGACTGTATTCAGTCCATTGGTTTAGAGTGGTTCTTGATGAGGCCCATACCATAAAATCCTCAAAAAGTCAAATTTCGATGGCTGCTGCTGCTCTGGTTGCTGATCGTCGTTGGTGTCTTACTGGGACTCCCATTCAGAACAGCGTGGAGGACATTTACAGCCTTCTTCGGTTTTTGAAGGTGGAACCTTGGGAAAATTGGGCATGGTGGAATAAACTTGTCCAAAAACCATTTGAGGAGGGTGATGAGAGAGGGCTAAAGTTGGTAAAGTCCATCTTAAAACCTATTATGTTAAGGAGAACAAAGACCAGTCGAGATCGAGAGGGCAGGCCAATTCTAGTTCTCCCTCCAGCTGATGTTAAGGTGATTTACTGCCAACTAACAGAAGCTGAAAAAGATTTCTATGAGGCTTTGTTTAAAAAATCCAAGGTTAAGTTTGATCAATTTGTTGAGCAAGGGCGGGTTCTTCATAATTATGCTTCTATTTTGGAATTACTTTTACGTCTTCGTCAATGCTGTGATCATCCGTTTCTTGTGATGAGTCGAGGTGATACGCAAGAATATTCTGATCTGAACAAGCTAGCTAAACGTTTCCTTAAAGGTGACCAGGTTGTCCTTGAAGGGGAAGCAATAAATGTGCCTTCAAGGGCATACATTAAAGAGGTTGTGGAGGAGCTAAGTAAGGGAGACCAGGGAGAGTGTCCAATCTGTCTCGAGGCATGTGAAGATGCAGTATTGACTCCTTGTGCTCATCGATTGTGTCGAGAGTGTCTCCTGGCAAGTTGGCGAAATGCTAGTTCCGGTTTATGTCCTGTTTGTAGGAAAGCCATCACAAGGCAAGAGCTTATTACGGCTCCGACTGACAGTAGATTCCAGATAGATATTGAGAAAAATTGGGTTGAATCTTCCAAAATTGTGGCTCTCTTGCAAGAACTTGAAATTCTTCGTATGTCAGGATCTAAAAGCATTCTCTTCAGTCAGTGGACTGCATTTCTAGATCTTTTACAAATCCCTCTTTCCAGGAGTAACATTTCATTTGTTCGTCTTGACGGGACTCTAAACCAGCAGCAGCGTGAAAGAGTTATAAAACAGTTTTCAGAAGATGACAGCATCCTGGTATTGCTGATGTCTCTGAAGGCTGGAGGGGTAGGGGTAAATTTAACAGCAGCGTCCAATGCCTTTGTTATGGATCCATGGTGGAATCCAGCTGTAGAGGAGCAAGCTGTCATGCGTATTCATCGCATTGGACAAACTAAAAGAGTGATGATCAGGCGGTTCATTGTGAAGGGAACAGTTGAGGAAAGAATGGAAGCAGTGCAAGCTCGCAAGCAGCTAATGATTTCAGGTGCCTTGACTGATCAAGAAGTTCGAACTGCGCGTATTGAAGAGCTGAAGATGCTGTTTACATAG

Protein:   MGTKLTEELVSTVRSIVGCDFSDMDIIRALHLAKNDPTAAINIILDTPNFISKQKNLTPKTPNPKSKTVPYKPPNFVVKDNGNRNSSQNLEVNCVENDATDSTVGDNGSVSGLAGSEWWFVGCGEVAGLSTCKGRRVKAGDEVDFTFPLKSKSSISPSPSPGKGSGRRRQAATACSEIVRFSTKDSGELGRIPNDWARCLLPLVRDGKVRIMGCCKSAPNVLGIMDTIQLSISVYLNSVMFHKHHRTSLKATANSTEETVGHPLSILFSLLGLTPFKKAEFTPADLNTRKRPLNSKDGSGLPVSLLNANKSKNQSGNGNEIENEESVSDADLENIVGGGDNSELEEMDPPSTLQCELRPYQKQALHWMIQLEKGKCMDGAATTLHPCWEAYHLADKRELVVYLNVFSGDATIEFPSTLQMARGGILADAMGLGKTIMTISLLLTHSDKGGLSNSQSGSQLCTGGGSSDNSDQHPNQLNKATKFSGIDKLKQTKMLVNGGNLIICPMTLLGQWKAELEIHAQPGSLSVYVHYGQSRVKDANFLAQSNVVITTYGVLASDFSAEGAVGNGGLYSVHWFRVVLDEAHTIKSSKSQISMAAAALVADRRWCLTGTPIQNSVEDIYSLLRFLKVEPWENWAWWNKLVQKPFEEGDERGLKLVKSILKPIMLRRTKTSRDREGRPILVLPPADVKVIYCQLTEAEKDFYEALFKKSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGDQVVLEGEAINVPSRAYIKEVVEELSKGDQGECPICLEACEDAVLTPCAHRLCRECLLASWRNASSGLCPVCRKAITRQELITAPTDSRFQIDIEKNWVESSKIVALLQELEILRMSGSKSILFSQWTAFLDLLQIPLSRSNISFVRLDGTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGVNLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKRVMIRRFIVKGTVEERMEAVQARKQLMISGALTDQEVRTARIEELKMLFT